1.
HyDe: A Python Package for Genome-Scale Hybridization Detection
by Blischak, Paul D
Systematic biology, 2018-09-01, Vol.67 (5), p.821-829

2.
Sources of Error Inherent in Species-Tree Estimation: Impact of Mutational and Coalescent Effects on Accuracy and Implications for Choosing among Different Methods
by Huang, Huateng
Systematic biology, 2010-10, Vol.59 (5), p.573-583

3.
Split Scores: A Tool to Quantify Phylogenetic Signal in Genome-Scale Data
by Allman, Elizabeth S
Systematic biology, 2017-07-01, Vol.66 (4), p.620-636

4.
Inferring Species-Level Phylogenies and Taxonomic Distinctiveness Using Multilocus Data in Sistrurus Rattlesnakes
by Kubatko, Laura S
Systematic biology, 2011, Vol.60 (4), p.393-409

5.
Comparative Performance of Popular Methods for Hybrid Detection using Genomic Data
by Kong, Sungsik
Systematic biology, Vol.70 (5), p.891-907

6.
Coestimating Reticulate Phylogenies and Gene Trees from Multilocus Sequence Data
by Wen, Dingqiao
Systematic biology, 2018-05-01, Vol.67 (3), p.439-457

7.
Long-Branch Attraction in Species Tree Estimation: Inconsistency of Partitioned Likelihood and Topology-Based Summary Methods
by Roch, Sebastien
Systematic biology, 2019-03-01, Vol.68 (2), p.281-297

8.
Species Tree Inference Methods Intended to Deal with Incomplete Lineage Sorting Are Robust to the Presence of Paralogs
by Yan, Zhi
Systematic biology, Vol.71 (2), p.367-381

9.
Accurate Inference of Tree Topologies from Multiple Sequence Alignments Using Deep Learning
by Suvorov, Anton
Systematic biology, 2019-09-03, Vol.69 (2), p.221-233

10.
Identification of Hidden Population Structure in Time-Scaled Phylogenies
by Volz, Erik M
Systematic biology, Vol.69 (5), p.884-896

11.
Diversification, Introgression, and Rampant Cytonuclear Discordance in Rocky Mountains Chipmunks (Sciuridae: Tamias)
by Sarver, Brice A J
Systematic biology, Vol.70 (5), p.908-921

12.
Full Bayesian Comparative Phylogeography from Genomic Data
by Oaks, Jamie R
Systematic biology, 2019-05-01, Vol.68 (3), p.371-395

13.
The Multilocus Multispecies Coalescent: A Flexible New Model of Gene Family Evolution
by Li, Qiuyi
Systematic biology, Vol.70 (4), p.822-837

14.
Bayesian Inference of Species Trees using Diffusion Models
by Stoltz, Marnus
Systematic biology, Vol.70 (1), p.145-161

15.
Phylogenetic Factor Analysis
by Tolkoff, Max R
Systematic biology, 2018-05-01, Vol.67 (3), p.384-399

16.
Hemiplasy: A New Term in the Lexicon of Phylogenetics
by Avise, John C.
Systematic biology, 2008-06, Vol.57 (3), p.503-507

17.
OSF-Builder: A New Tool for Constructing and Representing Evolutionary Histories Involving Introgression
by Scholz, Guillaume E
Systematic biology, 2019-09-01, Vol.68 (5), p.717-729

18.
Multilocus Phylogenetics of a Rapid Radiation in the Genus Thomomys (Rodentia: Geomyidae)
by Belfiore, Natalia M.
Systematic biology, 2008-04, Vol.57 (2), p.294-310

19.
Discordance of Species Trees with Their Most Likely Gene Trees: The Case of Five Taxa
by Rosenberg, Noah A.
Systematic biology, 2008-02, Vol.57 (1), p.131-140

20.
Wagner and Dollo: A Stochastic Duet by Composing Two Parsimonious Solos
by Alekseyenko, Alexander V.
Systematic biology, 2008-10, Vol.57 (5), p.772-784
