1.
Posterior Summarization in Bayesian Phylogenetics Using Tracer 1.7
by Rambaut, Andrew
Systematic biology, 2018-09-01, Vol.67 (5), p.901-904
2.
MrBayes 3.2: Efficient Bayesian Phylogenetic Inference and Model Choice Across a Large Model Space
by Ronquist, Fredrik
Systematic biology, 2012-05-01, Vol.61 (3), p.539-542
3.
Genealogical Working Distributions for Bayesian Model Testing with Phylogenetic Uncertainty
by Baele, Guy
Systematic biology, 2016-03-01, Vol.65 (2), p.250-264
4.
Emerging Concepts of Data Integration in Pathogen Phylodynamics
by Baele, Guy
Systematic biology, 2017-01-01, Vol.66 (1), p.e47-e65
5.
Understanding Past Population Dynamics: Bayesian Coalescent-Based Modeling with Covariates
by Gill, Mandev S
Systematic biology, 2016-11-01, Vol.65 (6), p.1041-1056
6.
BEAGLE: An Application Programming Interface and High-Performance Computing Library for Statistical Phylogenetics
by Ayres, Daniel L
Systematic biology, 2012-01-01, Vol.61 (1), p.170-173
7.
Inferring Heterogeneous Evolutionary Processes Through Time: from Sequence Substitution to Phylogeography
by Bielejec, Filip
Systematic biology, 2014-07-01, Vol.63 (4), p.493-504
8.
BEAGLE 3: Improved Performance, Scaling, and Usability for a High-Performance Computing Library for Statistical Phylogenetics
by Ayres, Daniel L
Systematic biology, 2019-11-01, Vol.68 (6), p.1052-1061
9.
A Relaxed Directional Random Walk Model for Phylogenetic Trait Evolution
by Gill, Mandev S
Systematic biology, 2017-05-01, Vol.66 (3), p.299-319
10.
On the Biogeography of Centipeda: A Species-Tree Diffusion Approach
by Nylinder, Stephan
Systematic biology, 2014-03-01, Vol.63 (2), p.178-191
11.
Markov-Modulated Continuous-Time Markov Chains to Identify Site- and Branch-Specific Evolutionary Variation in BEAST
by Baele, Guy
Systematic biology, Vol.70 (1), p.181-189
12.
Joint Bayesian Estimation of Alignment and Phylogeny
by Redelings, Benjamin D.
Systematic biology, 2005-06, Vol.54 (3), p.401-418
14.
Phylogenetic Factor Analysis
by Tolkoff, Max R
Systematic biology, 2018-05-01, Vol.67 (3), p.384-399
15.
Unifying Vertical and Nonvertical Evolution: A Stochastic ARG-based Framework
by Bloomquist, Erik W.
Systematic biology, 2009-11-09, Vol.59 (1), p.27-41
16.
Wagner and Dollo: A Stochastic Duet by Composing Two Parsimonious Solos
by Alekseyenko, Alexander V.
Systematic biology, 2008-10, Vol.57 (5), p.772-784
17.
Diversity, Disparity, and Evolutionary Rate Estimation for Unresolved Yule Trees
by Crawford, Forrest W
Systematic biology, 2013-05-01, Vol.62 (3), p.439-455
18.
A Nonparametric Method for Accommodating and Testing Across-Site Rate Variation
by Huelsenbeck, John P.
Systematic biology, 2007-12, Vol.56 (6), p.975-987
19.
Assessing transmissibility of HIV-1 drug resistance mutations from treated and from drug-naive individuals
by Winand, Raf
AIDS (London), 2015-09-24, Vol.29 (15), p.2045-2052
20.
Disentangling the impact of within-host evolution and transmission dynamics on the tempo of HIV-1 evolution
by Vrancken, Bram
AIDS (London), 2015-07-31, Vol.29 (12), p.1549-1556
