1.
SPAdes: A New Genome Assembly Algorithm and Its Applications to Single-Cell Sequencing
by Bankevich, Anton
Journal of computational biology, 2012-05-01, Vol.19 (5), p.455-477
2.
cutPrimers: A New Tool for Accurate Cutting of Primers from Reads of Targeted Next Generation Sequencing
by Kechin, Andrey
Journal of computational biology, 2017-11-01, Vol.24 (11), p.1138-1143
3.
WhatsHap: Weighted Haplotype Assembly for Future-Generation Sequencing Reads
by Patterson, Murray
Journal of computational biology, 2015-06-01, Vol.22 (6), p.498-509
4.
Ray: simultaneous assembly of reads from a mix of high-throughput sequencing technologies
by Boisvert, Sébastien
Journal of computational biology, 2010-11, Vol.17 (11), p.1519-1533
5.
Generating realistic in silico gene networks for performance assessment of reverse engineering methods
by Marbach, Daniel
Journal of computational biology, 2009-02, Vol.16 (2), p.229-239
6.
FSG: Fast String Graph Construction for De Novo Assembly
by Bonizzoni, Paola
Journal of computational biology, 2017-10-01, Vol.24 (10), p.953-968
7.
Clonality Inference from Single Tumor Samples Using Low-Coverage Sequence Data
by Donmez, Nilgun
Journal of computational biology, 2017-06-01, Vol.24 (6), p.515-523
8.
Shared Nearest Neighbor Clustering in a Locality Sensitive Hashing Framework
by Kanj, Sawsan
Journal of computational biology, 2018-02-01, Vol.25 (2), p.236-250
9.
Computational Disease Gene Prioritization: An Appraisal
by Gill, Nivit
Journal of computational biology, 2014-06-01, Vol.21 (6), p.456-465
10.
Calculating Sample Size Estimates for RNA Sequencing Data
by Hart, Steven N.
Journal of computational biology, 2013-12-01, Vol.20 (12), p.97-978
11.
A Provably Efficient Algorithm for the k-Mismatch Average Common Substring Problem
by Thankachan, Sharma V.
Journal of computational biology, 2016-06-01, Vol.23 (6), p.472-482
12.
Reducing Alignment Time Complexity of Ultra-Large Sets of Sequences
by Rubio-Largo, Álvaro
Journal of computational biology, 2017-11-01, Vol.24 (11), p.1144-1154
13.
HapCompass: A Fast Cycle Basis Algorithm for Accurate Haplotype Assembly of Sequence Data
by Aguiar, Derek
Journal of computational biology, 2012-06-01, Vol.19 (6), p.577-590
14.
Variability in Metagenomic Count Data and Its Influence on the Identification of Differentially Abundant Genes
by Jonsson, Viktor
Journal of computational biology, 2017-04-01, Vol.24 (4), p.311-326
15.
Compressing Genomic Sequence Fragments Using SlimGene
by Kozanitis, Christos
Journal of computational biology, 2011-03-01, Vol.18 (3), p.41-413
16.
Compression of Phylogenetic Networks and Algorithm for the Tree Containment Problem
by Gunawan, Andreas D.M.
Journal of computational biology, 2019-03-01, Vol.26 (3), p.285-294
17.
A System Architecture for Efficient Transmission of Massive DNA Sequencing Data
by Sağiroğlu, Mahmut Şamİl
Journal of computational biology, 2017-11-01, Vol.24 (11), p.181-1088
18.
Toward a Better Compression for DNA Sequences Using Huffman Encoding
by Al-Okaily, Anas
Journal of computational biology, 2017-04-01, Vol.24 (4), p.28-288
19.
Identifying Cell Subpopulations and Their Genetic Drivers from Single-Cell RNA-Seq Data Using a Biclustering Approach
by Shi, Funan
Journal of computational biology, 2017-07-01, Vol.24 (7), p.663-674
20.
dipSPAdes: Assembler for Highly Polymorphic Diploid Genomes
by Safonova, Yana
Journal of computational biology, 2015-06-01, Vol.22 (6), p.528-545
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