1.
Posterior Summarization in Bayesian Phylogenetics Using Tracer 1.7
by Rambaut, Andrew
Systematic biology, 2018-09-01, Vol.67 (5), p.901-904
2.
BEAGLE: An Application Programming Interface and High-Performance Computing Library for Statistical Phylogenetics
by Ayres, Daniel L
Systematic biology, 2012-01-01, Vol.61 (1), p.170-173
3.
MrBayes 3.2: Efficient Bayesian Phylogenetic Inference and Model Choice Across a Large Model Space
by Ronquist, Fredrik
Systematic biology, 2012-05-01, Vol.61 (3), p.539-542
4.
BEAGLE 3: Improved Performance, Scaling, and Usability for a High-Performance Computing Library for Statistical Phylogenetics
by Ayres, Daniel L
Systematic biology, 2019-11-01, Vol.68 (6), p.1052-1061
5.
RevBayes: Bayesian Phylogenetic Inference Using Graphical Models and an Interactive Model-Specification Language
by Höhna, Sebastian
Systematic biology, 2016-07-01, Vol.65 (4), p.726-736
6.
Inferring Phylogenetic Networks Using PhyloNet
by Wen, Dingqiao
Systematic biology, 2018-07-01, Vol.67 (4), p.735-740
7.
A Gateway for Phylogenetic Analysis Powered by Grid Computing Featuring GARLI 2.0
by Bazinet, Adam L
Systematic biology, 2014-09-01, Vol.63 (5), p.812-818
8.
HyDe: A Python Package for Genome-Scale Hybridization Detection
by Blischak, Paul D
Systematic biology, 2018-09-01, Vol.67 (5), p.821-829
9.
Pruning Rogue Taxa Improves Phylogenetic Accuracy: An Efficient Algorithm and Webservice
by Aberer, Andre J
Systematic biology, 2013-01-01, Vol.62 (1), p.162-166
10.
Infomap Bioregions: Interactive Mapping of Biogeographical Regions from Species Distributions
by Edler, Daniel
Systematic biology, 2017-03-01, Vol.66 (2), p.197-204
11.
The Phylogenetic Likelihood Library
by Flouri, T
Systematic biology, 2015-03-01, Vol.64 (2), p.356-362
12.
SimPhy: Phylogenomic Simulation of Gene, Locus, and Species Trees
by Mallo, Diego
Systematic biology, 2016-03-01, Vol.65 (2), p.334-344
13.
Phylodynamic Model Adequacy Using Posterior Predictive Simulations
by Duchene, Sebastian
Systematic biology, 2019-03-01, Vol.68 (2), p.358-364
14.
Dendroscope 3: An Interactive Tool for Rooted Phylogenetic Trees and Networks
by Huson, Daniel H
Systematic biology, 2012-12-01, Vol.61 (6), p.1061-1067
15.
PhyloBayes MPI: Phylogenetic Reconstruction with Infinite Mixtures of Profiles in a Parallel Environment
by Lartillot, Nicolas
Systematic biology, 2013-07-01, Vol.62 (4), p.611-615
16.
PHRAPL: Phylogeographic Inference Using Approximate Likelihoods
by Jackson, Nathon D
Systematic biology, 2017-11-01, Vol.66 (6), p.1045-1053
17.
ProtASR: An Evolutionary Framework for Ancestral Protein Reconstruction with Selection on Folding Stability
by Arenas, Miguel
Systematic biology, 2017-11-01, Vol.66 (6), p.1054-1064
18.
A Linear-Time Algorithm for Gaussian and Non-Gaussian Trait Evolution Models
by Ho, Lam si Tung
Systematic biology, 2014-05-01, Vol.63 (3), p.397-408
19.
Computational Performance and Statistical Accuracy of BEAST and Comparisons with Other Methods
by Ogilvie, Huw A
Systematic biology, 2016-05-01, Vol.65 (3), p.381-396
20.
Generalized Bootstrap Supports for Phylogenetic Analyses of Protein Sequences Incorporating Alignment Uncertainty
by Chatzou, Maria
Systematic biology, 2018-11-01, Vol.67 (6), p.997-1009
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