1.
MrBayes 3.2: Efficient Bayesian Phylogenetic Inference and Model Choice Across a Large Model Space
by Ronquist, Fredrik
Systematic biology, 2012-05-01, Vol.61 (3), p.539-542

2.
RevBayes: Bayesian Phylogenetic Inference Using Graphical Models and an Interactive Model-Specification Language
by Höhna, Sebastian
Systematic biology, 2016-07-01, Vol.65 (4), p.726-736

3.
Pruning Rogue Taxa Improves Phylogenetic Accuracy: An Efficient Algorithm and Webservice
by Aberer, Andre J
Systematic biology, 2013-01-01, Vol.62 (1), p.162-166

4.
The Phylogenetic Likelihood Library
by Flouri, T
Systematic biology, 2015-03-01, Vol.64 (2), p.356-362

5.
EPA-ng: Massively Parallel Evolutionary Placement of Genetic Sequences
by Barbera, Pierre
Systematic biology, 2019-03-01, Vol.68 (2), p.365-369

6.
Dendroscope 3: An Interactive Tool for Rooted Phylogenetic Trees and Networks
by Huson, Daniel H
Systematic biology, 2012-12-01, Vol.61 (6), p.1061-1067

7.
APPLES: Scalable Distance-Based Phylogenetic Placement with or without Alignments
by Balaban, Metin Metin
Systematic biology, 2019-09-23, Vol.69 (3), p.566-578

8.
ProtASR: An Evolutionary Framework for Ancestral Protein Reconstruction with Selection on Folding Stability
by Arenas, Miguel
Systematic biology, 2017-11-01, Vol.66 (6), p.1054-1064

9.
Phycas: Software for Bayesian Phylogenetic Analysis
by Lewis, Paul O
Systematic biology, 2015-05-01, Vol.64 (3), p.525-531

10.
IKey+: A New Single-Access Key Generation Web Service
by Burguiere, Thomas
Systematic biology, 2013-01-01, Vol.62 (1), p.157-161

11.
A Linear-Time Algorithm for Gaussian and Non-Gaussian Trait Evolution Models
by Ho, Lam si Tung
Systematic biology, 2014-05-01, Vol.63 (3), p.397-408

12.
Probabilistic Graphical Model Representation in Phylogenetics
by Höhna, Sebastian
Systematic biology, 2014-09-01, Vol.63 (5), p.753-771
