1.
BEAGLE: An Application Programming Interface and High-Performance Computing Library for Statistical Phylogenetics
by Ayres, Daniel L
Systematic biology, 2012-01-01, Vol.61 (1), p.170-173

2.
MrBayes 3.2: Efficient Bayesian Phylogenetic Inference and Model Choice Across a Large Model Space
by Ronquist, Fredrik
Systematic biology, 2012-05-01, Vol.61 (3), p.539-542

3.
RevBayes: Bayesian Phylogenetic Inference Using Graphical Models and an Interactive Model-Specification Language
by Höhna, Sebastian
Systematic biology, 2016-07-01, Vol.65 (4), p.726-736

4.
A Gateway for Phylogenetic Analysis Powered by Grid Computing Featuring GARLI 2.0
by Bazinet, Adam L
Systematic biology, 2014-09-01, Vol.63 (5), p.812-818

5.
Pruning Rogue Taxa Improves Phylogenetic Accuracy: An Efficient Algorithm and Webservice
by Aberer, Andre J
Systematic biology, 2013-01-01, Vol.62 (1), p.162-166

6.
Dendroscope 3: An Interactive Tool for Rooted Phylogenetic Trees and Networks
by Huson, Daniel H
Systematic biology, 2012-12-01, Vol.61 (6), p.1061-1067

7.
PhyloBayes MPI: Phylogenetic Reconstruction with Infinite Mixtures of Profiles in a Parallel Environment
by Lartillot, Nicolas
Systematic biology, 2013-07-01, Vol.62 (4), p.611-615

8.
Generalized Bootstrap Supports for Phylogenetic Analyses of Protein Sequences Incorporating Alignment Uncertainty
by Chatzou, Maria
Systematic biology, 2018-11-01, Vol.67 (6), p.997-1009

9.
SpeciesGeoCoder: Fast Categorization of Species Occurrences for Analyses of Biodiversity, Biogeography, Ecology, and Evolution
by Töpel, Mats
Systematic biology, 2017-03-01, Vol.66 (2), p.145-151

10.
An Intuitive, Informative, and Most Balanced Representation of Phylogenetic Topologies
by Iwasaki, Wataru
Systematic biology, 2010-10, Vol.59 (5), p.584-593
