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Single-cell meta-analysis of SARS-CoV-2 entry genes across tissues and demographics
by Muus, Christoph
Nature medicine, 2021-03, Vol.27 (3), p.546-559
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Near-optimal probabilistic RNA-seq quantification
by Bray, Nicolas L
Nature biotechnology, 2016-05, Vol.34 (5), p.525-527
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Graph-based genome alignment and genotyping with HISAT2 and HISAT-genotype
by Kim, Daehwan
Nature biotechnology, 2019-08, Vol.37 (8), p.907-915
4.
StringTie enables improved reconstruction of a transcriptome from RNA-seq reads
by Pertea, Mihaela
Nature biotechnology, 2015-03, Vol.33 (3), p.290-295
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Integrating single-cell transcriptomic data across different conditions, technologies, and species
by Butler, Andrew
Nature biotechnology, 2018-06, Vol.36 (5), p.411-420
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Full-length transcriptome assembly from RNA-Seq data without a reference genome
by Friedman, Nir
Nature biotechnology, 2011-07, Vol.29 (7), p.644-652
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Low-coverage single-cell mRNA sequencing reveals cellular heterogeneity and activated signaling pathways in developing cerebral cortex
by Pollen, Alex A
Nature biotechnology, 2014-10, Vol.32 (10), p.1053-1058
8.
Reproducible RNA-seq analysis using recount2
by Collado-Torres, Leonardo
Nature biotechnology, 2017-04-11, Vol.35 (4), p.319-321
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Determining cell type abundance and expression from bulk tissues with digital cytometry
by Newman, Aaron M
Nature biotechnology, 2019-07, Vol.37 (7), p.773-782
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Sailfish enables alignment-free isoform quantification from RNA-seq reads using lightweight algorithms
by Patro, Rob
Nature biotechnology, 2014-05, Vol.32 (5), p.462-464
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Integration of electrophysiological recordings with single-cell RNA-seq data identifies neuronal subtypes
by Fuzik, János
Nature biotechnology, 2016-02, Vol.34 (2), p.175-183
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Genome-scale deletion screening of human long non-coding RNAs using a paired-guide RNA CRISPR-Cas9 library
by Zhu, Shiyou
Nature biotechnology, 2016-12, Vol.34 (12), p.1279-1286
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Transcript assembly and quantification by RNA-Seq reveals unannotated transcripts and isoform switching during cell differentiation
by Pachter, Lior
Nature biotechnology, 2010-05, Vol.28 (5), p.511-515
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Multiplex gene editing by CRISPR-Cpf1 using a single crRNA array
by Zetsche, Bernd
Nature biotechnology, 2017, Vol.35 (1), p.31-34
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High-throughput sequencing of the transcriptome and chromatin accessibility in the same cell
by Chen, Song
Nature biotechnology, 2019-10-14, Vol.37 (12), p.1452-1457
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Full-length mRNA-Seq from single-cell levels of RNA and individual circulating tumor cells
by RAMSKÖLD, Daniel
Nature biotechnology, 2012, Vol.30 (8), p.777-782
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Simultaneous single-cell profiling of lineages and cell types in the vertebrate brain
by Raj, Bushra
Nature biotechnology, 2018-06, Vol.36 (5), p.442-450
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A single-cell atlas of the peripheral immune response in patients with severe COVID-19
by Wilk, Aaron J
Nature medicine, 2020-07, Vol.26 (7), p.1070-1076
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Identification of direct targets and modified bases of RNA cytosine methyltransferases
by Khoddami, Vahid
Nature biotechnology, 2013-05, Vol.31 (5), p.458-464
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Reproducibility of high-throughput mRNA and small RNA sequencing across laboratories
by 't Hoen, Peter A C
Nature biotechnology, 2013-11, Vol.31 (11), p.1015-1022
