1.
A Rapid Bootstrap Algorithm for the RAxML Web Servers
by Stamatakis, Alexandros
Systematic biology, 2008-10, Vol.57 (5), p.758-771

2.
Pruning Rogue Taxa Improves Phylogenetic Accuracy: An Efficient Algorithm and Webservice
by Aberer, Andre J
Systematic biology, 2013-01-01, Vol.62 (1), p.162-166

3.
Performance, Accuracy, and Web Server for Evolutionary Placement of Short Sequence Reads under Maximum Likelihood
by Berger, Simon A
Systematic biology, 2011-05-01, Vol.60 (3), p.291-302

4.
SATé-II: Very Fast and Accurate Simultaneous Estimation of Multiple Sequence Alignments and Phylogenetic Trees
by Liu, Kevin
Systematic biology, 2012-01-01, Vol.61 (1), p.90-106

5.
Short Tree, Long Tree, Right Tree, Wrong Tree: New Acquisition Bias Corrections for Inferring SNP Phylogenies
by Leaché, Adam D
Systematic biology, 2015-11-01, Vol.64 (6), p.1032-1047

6.
EPA-ng: Massively Parallel Evolutionary Placement of Genetic Sequences
by Barbera, Pierre
Systematic biology, 2019-03-01, Vol.68 (2), p.365-369

7.
An Efficient Independence Sampler for Updating Branches in Bayesian Markov chain Monte Carlo Sampling of Phylogenetic Trees
by Aberer, Andre J
Systematic biology, 2016-01-01, Vol.65 (1), p.161-176

8.
Impacts of Terraces on Phylogenetic Inference
by Sanderson, Michael J
Systematic biology, 2015-09-01, Vol.64 (5), p.709-726

9.
HIV-1 full-genome phylogenetics of generalized epidemics in sub-Saharan Africa: impact of missing nucleotide characters in next-generation sequences
by Ratmann, Oliver
AIDS research and human retroviruses, 2017, Vol.33 (ja), p.1083-1098

10.
Phylogenomic analyses data of the avian phylogenomics project
by Jarvis, Erich D
Gigascience, 2015, Vol.4 (1), p.4-4

11.
How many bootstrap replicates are necessary?
by Pattengale, Nicholas D
Journal of computational biology, 2010-03, Vol.17 (3), p.337-354

12.
The Phylogenetic Likelihood Library
by Flouri, T
Systematic biology, 2015-03-01, Vol.64 (2), p.356-362

13.
HIV-1 Full-Genome Phylogenetics of Generalized Epidemics in Sub-Saharan Africa: Impact of Missing Nucleotide Characters in Next-Generation Sequences
by Ratmann, Oliver
AIDS research and human retroviruses, 2017-11-01, Vol.33 (11), p.183-1098

14.
SATé-II: Very Fast and Accurate Simultaneous Estimation of Multiple Sequence Alignments and Phylogenetic Trees
by Liu, Kevin
Systematic biology, Vol.61 (1), p.90-106
