1.
Dendroscope 3: An Interactive Tool for Rooted Phylogenetic Trees and Networks
by Huson, Daniel H
Systematic biology, 2012-12-01, Vol.61 (6), p.1061-1067

2.
Inferring Phylogenetic Networks Using PhyloNet
by Wen, Dingqiao
Systematic biology, 2018-07-01, Vol.67 (4), p.735-740

3.
Modeling Hybridization Under the Network Multispecies Coalescent
by Degnan, James H
Systematic biology, 2018-09-01, Vol.67 (5), p.786-799

4.
Which Phylogenetic Networks are Merely Trees with Additional Arcs?
by Francis, Andrew R
Systematic biology, 2015-09-01, Vol.64 (5), p.768-777

5.
A Comprehensive Approach to Detect Hybridization Sheds Light on the Evolution of Earth’s Largest Lizards
by Pavón-Vázquez, Carlos J
Systematic biology, Vol.70 (5), p.877-890

6.

7.
Coestimating Reticulate Phylogenies and Gene Trees from Multilocus Sequence Data
by Wen, Dingqiao
Systematic biology, 2018-05-01, Vol.67 (3), p.439-457

8.
Phylogenomic Signatures of Ancient Introgression in a Rogue Lineage of Darters (Teleostei: Percidae)
by MacGuigan, Daniel J
Systematic biology, 2019-03-01, Vol.68 (2), p.329-346

9.
Improved Maximum Parsimony Models for Phylogenetic Networks
by van Iersel, L.J.J
Systematic biology, 2018-05-01, Vol.67 (3), p.518-542

10.
How Much Information is Needed to Infer Reticulate Evolutionary Histories?
by Huber, Katharina T
Systematic biology, 2015-01-01, Vol.64 (1), p.102-111

11.
Combinatorial Scoring of Phylogenetic Trees and Networks Based on Homoplasy-Free Characters
by Alexeev, Nikita
Journal of computational biology, 2018-11-01, Vol.25 (11), p.123-1219

12.
Constructing Phylogenies in the Presence Of Intra-Individual Site Polymorphisms (2ISPs) with a Focus on the Nuclear Ribosomal Cistron
by Potts, Alastair J
Systematic biology, 2014-01-01, Vol.63 (1), p.1-16

13.
OSF-Builder: A New Tool for Constructing and Representing Evolutionary Histories Involving Introgression
by Scholz, Guillaume E
Systematic biology, 2019-09-01, Vol.68 (5), p.717-729

14.
Compression of Phylogenetic Networks and Algorithm for the Tree Containment Problem
by Gunawan, Andreas D.M.
Journal of computational biology, 2019-03-01, Vol.26 (3), p.285-294

15.
Incorporating Allelic Variation for Reconstructing the Evolutionary History of Organisms from Multiple Genes: An Example from Rosa in North America
by Joly, Simon
Systematic biology, 2006-08, Vol.55 (4), p.623-636

16.
Is the Tree of Life the Best Metaphor, Model, or Heuristic for Phylogenetics?
by Morrison, David A
Systematic biology, 2014-07-01, Vol.63 (4), p.628-638

17.
Reconstructing One-Articulated Networks with Distance Matrices
by Chang, Kuang-Yu
Journal of computational biology, 2018-03-01, Vol.25 (3), p.253-269

18.
The Chaos Prevails: Molecular Phylogeny of the Haptoria (Ciliophora, Litostomatea)
by Vďačný, Peter
Protist, 2014-01, Vol.165 (1), p.93-111

19.
An Efficient Algorithm for the Rooted Triplet Distance Between Galled Trees
by Jansson, Jesper
Journal of computational biology, 2019-09-01, Vol.26 (9), p.893-907

20.
Statistical Inference of Allopolyploid Species Networks in the Presence of Incomplete Lineage Sorting
by Jones, Graham
Systematic biology, 2013-05-01, Vol.62 (3), p.467-478
