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Genome-wide association study confirms lung cancer susceptibility loci on chromosomes 5p15 and 15q25 in an African-American population

Highlights • Confirmed previous reports that two loci on 15q25.1 and 5p15.33 are associated with lung cancer. • Two loci associated with lung cancer are near plausible candidate genes, CHRNA5 and TERT. • No SNPs reached genome-wide significance for the main effect model examining cigarettes per day.... Full description

Journal Title: Lung cancer (Amsterdam Netherlands), 2016, Vol.98, p.33-42
Main Author: Zanetti, Krista A
Other Authors: Wang, Zhaoming , Aldrich, Melinda , Amos, Christopher I , Blot, William J , Bowman, Elise D , Burdette, Laurie , Cai, Qiuyin , Caporaso, Neil , Chung, Charles C , Gillanders, Elizabeth M , Haiman, Christopher A , Hansen, Helen M , Henderson, Brian E , Kolonel, Laurence N , Marchand, Loic Le , Li, Shengchao , McNeill, Lorna Haughton , Ryan, Bríd M , Schwartz, Ann G , Sison, Jennette D , Spitz, Margaret R , Tucker, Margaret , Wenzlaff, Angela S , Wiencke, John K , Wilkens, Lynne , Wrensch, Margaret R , Wu, Xifeng , Zheng, Wei , Zhou, Weiyin , Christiani, David , Palmer, Julie R , Penning, Trevor M , Rieber, Alyssa G , Rosenberg, Lynn , Ruiz-Narvaez, Edward A , Su, Li , Vachani, Anil , Wei, Yongyue , Whitehead, Alexander S , Chanock, Stephen J , Harris, Curtis C
Format: Electronic Article Electronic Article
Language: English
Subjects:
Quelle: Alma/SFX Local Collection
Publisher: Ireland: Elsevier B.V
ID: ISSN: 0169-5002
Link: https://www.ncbi.nlm.nih.gov/pubmed/27393504
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title: Genome-wide association study confirms lung cancer susceptibility loci on chromosomes 5p15 and 15q25 in an African-American population
format: Article
creator:
  • Zanetti, Krista A
  • Wang, Zhaoming
  • Aldrich, Melinda
  • Amos, Christopher I
  • Blot, William J
  • Bowman, Elise D
  • Burdette, Laurie
  • Cai, Qiuyin
  • Caporaso, Neil
  • Chung, Charles C
  • Gillanders, Elizabeth M
  • Haiman, Christopher A
  • Hansen, Helen M
  • Henderson, Brian E
  • Kolonel, Laurence N
  • Marchand, Loic Le
  • Li, Shengchao
  • McNeill, Lorna Haughton
  • Ryan, Bríd M
  • Schwartz, Ann G
  • Sison, Jennette D
  • Spitz, Margaret R
  • Tucker, Margaret
  • Wenzlaff, Angela S
  • Wiencke, John K
  • Wilkens, Lynne
  • Wrensch, Margaret R
  • Wu, Xifeng
  • Zheng, Wei
  • Zhou, Weiyin
  • Christiani, David
  • Palmer, Julie R
  • Penning, Trevor M
  • Rieber, Alyssa G
  • Rosenberg, Lynn
  • Ruiz-Narvaez, Edward A
  • Su, Li
  • Vachani, Anil
  • Wei, Yongyue
  • Whitehead, Alexander S
  • Chanock, Stephen J
  • Harris, Curtis C
subjects:
  • African Americans
  • African Americans - genetics
  • Analysis
  • Cancer
  • Case-Control Studies
  • Chromosomes
  • Chromosomes, Human, Pair 15
  • Chromosomes, Human, Pair 5
  • Disease susceptibility
  • Epidemiology
  • Genetic aspects
  • Genetic Predisposition to Disease
  • Genetic research
  • Genome-Wide Association Study
  • Genomics
  • Hematology, Oncology and Palliative Medicine
  • Humans
  • Lung cancer
  • Lung neoplasms
  • Lung Neoplasms - epidemiology
  • Lung Neoplasms - genetics
  • Medicine, Preventive
  • Oncology, Experimental
  • Polymorphism, Single Nucleotide
  • Population Surveillance
  • Preventive health services
  • Pulmonary/Respiratory
  • Quantitative Trait Loci
  • Receptors, Cholinergic
  • Smoking
  • Telomerase
ispartof: Lung cancer (Amsterdam, Netherlands), 2016, Vol.98, p.33-42
description: Highlights • Confirmed previous reports that two loci on 15q25.1 and 5p15.33 are associated with lung cancer. • Two loci associated with lung cancer are near plausible candidate genes, CHRNA5 and TERT. • No SNPs reached genome-wide significance for the main effect model examining cigarettes per day.
language: eng
source: Alma/SFX Local Collection
identifier: ISSN: 0169-5002
fulltext: fulltext
issn:
  • 0169-5002
  • 1872-8332
url: Link


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titleGenome-wide association study confirms lung cancer susceptibility loci on chromosomes 5p15 and 15q25 in an African-American population
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creatorcontribZanetti, Krista A ; Wang, Zhaoming ; Aldrich, Melinda ; Amos, Christopher I ; Blot, William J ; Bowman, Elise D ; Burdette, Laurie ; Cai, Qiuyin ; Caporaso, Neil ; Chung, Charles C ; Gillanders, Elizabeth M ; Haiman, Christopher A ; Hansen, Helen M ; Henderson, Brian E ; Kolonel, Laurence N ; Marchand, Loic Le ; Li, Shengchao ; McNeill, Lorna Haughton ; Ryan, Bríd M ; Schwartz, Ann G ; Sison, Jennette D ; Spitz, Margaret R ; Tucker, Margaret ; Wenzlaff, Angela S ; Wiencke, John K ; Wilkens, Lynne ; Wrensch, Margaret R ; Wu, Xifeng ; Zheng, Wei ; Zhou, Weiyin ; Christiani, David ; Palmer, Julie R ; Penning, Trevor M ; Rieber, Alyssa G ; Rosenberg, Lynn ; Ruiz-Narvaez, Edward A ; Su, Li ; Vachani, Anil ; Wei, Yongyue ; Whitehead, Alexander S ; Chanock, Stephen J ; Harris, Curtis C
descriptionHighlights • Confirmed previous reports that two loci on 15q25.1 and 5p15.33 are associated with lung cancer. • Two loci associated with lung cancer are near plausible candidate genes, CHRNA5 and TERT. • No SNPs reached genome-wide significance for the main effect model examining cigarettes per day.
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languageeng
publisherIreland: Elsevier B.V
subjectAfrican Americans ; African Americans - genetics ; Analysis ; Cancer ; Case-Control Studies ; Chromosomes ; Chromosomes, Human, Pair 15 ; Chromosomes, Human, Pair 5 ; Disease susceptibility ; Epidemiology ; Genetic aspects ; Genetic Predisposition to Disease ; Genetic research ; Genome-Wide Association Study ; Genomics ; Hematology, Oncology and Palliative Medicine ; Humans ; Lung cancer ; Lung neoplasms ; Lung Neoplasms - epidemiology ; Lung Neoplasms - genetics ; Medicine, Preventive ; Oncology, Experimental ; Polymorphism, Single Nucleotide ; Population Surveillance ; Preventive health services ; Pulmonary/Respiratory ; Quantitative Trait Loci ; Receptors, Cholinergic ; Smoking ; Telomerase
ispartofLung cancer (Amsterdam, Netherlands), 2016, Vol.98, p.33-42
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0Zanetti, Krista A
1Wang, Zhaoming
2Aldrich, Melinda
3Amos, Christopher I
4Blot, William J
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6Burdette, Laurie
7Cai, Qiuyin
8Caporaso, Neil
9Chung, Charles C
10Gillanders, Elizabeth M
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13Henderson, Brian E
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16Li, Shengchao
17McNeill, Lorna Haughton
18Ryan, Bríd M
19Schwartz, Ann G
20Sison, Jennette D
21Spitz, Margaret R
22Tucker, Margaret
23Wenzlaff, Angela S
24Wiencke, John K
25Wilkens, Lynne
26Wrensch, Margaret R
27Wu, Xifeng
28Zheng, Wei
29Zhou, Weiyin
30Christiani, David
31Palmer, Julie R
32Penning, Trevor M
33Rieber, Alyssa G
34Rosenberg, Lynn
35Ruiz-Narvaez, Edward A
36Su, Li
37Vachani, Anil
38Wei, Yongyue
39Whitehead, Alexander S
40Chanock, Stephen J
41Harris, Curtis C
title
0Genome-wide association study confirms lung cancer susceptibility loci on chromosomes 5p15 and 15q25 in an African-American population
1Lung cancer (Amsterdam, Netherlands)
addtitleLung Cancer
descriptionHighlights • Confirmed previous reports that two loci on 15q25.1 and 5p15.33 are associated with lung cancer. • Two loci associated with lung cancer are near plausible candidate genes, CHRNA5 and TERT. • No SNPs reached genome-wide significance for the main effect model examining cigarettes per day.
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0African Americans
1African Americans - genetics
2Analysis
3Cancer
4Case-Control Studies
5Chromosomes
6Chromosomes, Human, Pair 15
7Chromosomes, Human, Pair 5
8Disease susceptibility
9Epidemiology
10Genetic aspects
11Genetic Predisposition to Disease
12Genetic research
13Genome-Wide Association Study
14Genomics
15Hematology, Oncology and Palliative Medicine
16Humans
17Lung cancer
18Lung neoplasms
19Lung Neoplasms - epidemiology
20Lung Neoplasms - genetics
21Medicine, Preventive
22Oncology, Experimental
23Polymorphism, Single Nucleotide
24Population Surveillance
25Preventive health services
26Pulmonary/Respiratory
27Quantitative Trait Loci
28Receptors, Cholinergic
29Smoking
30Telomerase
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1Wang, Zhaoming
2Aldrich, Melinda
3Amos, Christopher I
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8Caporaso, Neil
9Chung, Charles C
10Gillanders, Elizabeth M
11Haiman, Christopher A
12Hansen, Helen M
13Henderson, Brian E
14Kolonel, Laurence N
15Marchand, Loic Le
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19Schwartz, Ann G
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21Spitz, Margaret R
22Tucker, Margaret
23Wenzlaff, Angela S
24Wiencke, John K
25Wilkens, Lynne
26Wrensch, Margaret R
27Wu, Xifeng
28Zheng, Wei
29Zhou, Weiyin
30Christiani, David
31Palmer, Julie R
32Penning, Trevor M
33Rieber, Alyssa G
34Rosenberg, Lynn
35Ruiz-Narvaez, Edward A
36Su, Li
37Vachani, Anil
38Wei, Yongyue
39Whitehead, Alexander S
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titleGenome-wide association study confirms lung cancer susceptibility loci on chromosomes 5p15 and 15q25 in an African-American population
authorZanetti, Krista A ; Wang, Zhaoming ; Aldrich, Melinda ; Amos, Christopher I ; Blot, William J ; Bowman, Elise D ; Burdette, Laurie ; Cai, Qiuyin ; Caporaso, Neil ; Chung, Charles C ; Gillanders, Elizabeth M ; Haiman, Christopher A ; Hansen, Helen M ; Henderson, Brian E ; Kolonel, Laurence N ; Marchand, Loic Le ; Li, Shengchao ; McNeill, Lorna Haughton ; Ryan, Bríd M ; Schwartz, Ann G ; Sison, Jennette D ; Spitz, Margaret R ; Tucker, Margaret ; Wenzlaff, Angela S ; Wiencke, John K ; Wilkens, Lynne ; Wrensch, Margaret R ; Wu, Xifeng ; Zheng, Wei ; Zhou, Weiyin ; Christiani, David ; Palmer, Julie R ; Penning, Trevor M ; Rieber, Alyssa G ; Rosenberg, Lynn ; Ruiz-Narvaez, Edward A ; Su, Li ; Vachani, Anil ; Wei, Yongyue ; Whitehead, Alexander S ; Chanock, Stephen J ; Harris, Curtis C
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9Epidemiology
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22Oncology, Experimental
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24Population Surveillance
25Preventive health services
26Pulmonary/Respiratory
27Quantitative Trait Loci
28Receptors, Cholinergic
29Smoking
30Telomerase
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3Amos, Christopher I
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7Cai, Qiuyin
8Caporaso, Neil
9Chung, Charles C
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36Su, Li
37Vachani, Anil
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0Zanetti, Krista A
1Wang, Zhaoming
2Aldrich, Melinda
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8Caporaso, Neil
9Chung, Charles C
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27Wu, Xifeng
28Zheng, Wei
29Zhou, Weiyin
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32Penning, Trevor M
33Rieber, Alyssa G
34Rosenberg, Lynn
35Ruiz-Narvaez, Edward A
36Su, Li
37Vachani, Anil
38Wei, Yongyue
39Whitehead, Alexander S
40Chanock, Stephen J
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atitleGenome-wide association study confirms lung cancer susceptibility loci on chromosomes 5p15 and 15q25 in an African-American population
jtitleLung cancer (Amsterdam, Netherlands)
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abstractHighlights • Confirmed previous reports that two loci on 15q25.1 and 5p15.33 are associated with lung cancer. • Two loci associated with lung cancer are near plausible candidate genes, CHRNA5 and TERT. • No SNPs reached genome-wide significance for the main effect model examining cigarettes per day.
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doi10.1016/j.lungcan.2016.05.008
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