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Genome Sequencing and Evolutionary Analysis of Marine Gut Fungus Aspergillus sp. Z5 from Ligia oceanica: Supplementary Issue: Bioinformatics Methods and Applications for Big Metagenomics Data

Aspergillus sp. Z5, isolated from the gut of marine isopods, produces prolific secondary metabolites with new structure and bioactivity. Here, we report the draft sequence of the approximately 33.8-Mbp genome of this strain. To the best of our knowledge, this is the first genome sequence of Aspergil... Full description

Journal Title: Evolutionary Bioinformatics January 2016, Vol.12s1
Main Author: Li, Xue
Other Authors: Xu, Jin-Zhong , Wang, Wen-Jie , Chen, Yi-Wang , Zheng, Dao-Qiong , Di, Ya-Nan , Li, Ping , Wang, Pin-Mei , Li, Yu-Dong
Format: Electronic Article Electronic Article
Language: English
Subjects:
ID: E-ISSN: 1176-9343 ; DOI: 10.4137/EBO.S37532
Link: https://journals.sagepub.com/doi/full/10.4137/EBO.S37532
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recordid: sage_s10_4137_EBO_S37532
title: Genome Sequencing and Evolutionary Analysis of Marine Gut Fungus Aspergillus sp. Z5 from Ligia oceanica: Supplementary Issue: Bioinformatics Methods and Applications for Big Metagenomics Data
format: Article
creator:
  • Li, Xue
  • Xu, Jin-Zhong
  • Wang, Wen-Jie
  • Chen, Yi-Wang
  • Zheng, Dao-Qiong
  • Di, Ya-Nan
  • Li, Ping
  • Wang, Pin-Mei
  • Li, Yu-Dong
subjects:
  • Marine Isopod
  • Aspergillus
  • Genome
  • Secondary Metabolites
  • Biology
ispartof: Evolutionary Bioinformatics, January 2016, Vol.12s1
description: Aspergillus sp. Z5, isolated from the gut of marine isopods, produces prolific secondary metabolites with new structure and bioactivity. Here, we report the draft sequence of the approximately 33.8-Mbp genome of this strain. To the best of our knowledge, this is the first genome sequence of Aspergillus strain isolated from marine isopod Ligia oceanica. The phylogenetic analysis supported that this strain was closely related to A. versicolor, and genomic analysis revealed that Aspergillus sp. Z5 shared a high degree of colinearity with the genome of A. sydowii. Our results may facilitate studies on discovering the biosynthetic pathways of secondary metabolites and elucidating their evolution in this species.
language: eng
source:
identifier: E-ISSN: 1176-9343 ; DOI: 10.4137/EBO.S37532
fulltext: fulltext_linktorsrc
issn:
  • 1176-9343
  • 11769343
url: Link


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titleGenome Sequencing and Evolutionary Analysis of Marine Gut Fungus Aspergillus sp. Z5 from Ligia oceanica: Supplementary Issue: Bioinformatics Methods and Applications for Big Metagenomics Data
creatorLi, Xue ; Xu, Jin-Zhong ; Wang, Wen-Jie ; Chen, Yi-Wang ; Zheng, Dao-Qiong ; Di, Ya-Nan ; Li, Ping ; Wang, Pin-Mei ; Li, Yu-Dong
ispartofEvolutionary Bioinformatics, January 2016, Vol.12s1
identifierE-ISSN: 1176-9343 ; DOI: 10.4137/EBO.S37532
subjectMarine Isopod ; Aspergillus ; Genome ; Secondary Metabolites ; Biology
descriptionAspergillus sp. Z5, isolated from the gut of marine isopods, produces prolific secondary metabolites with new structure and bioactivity. Here, we report the draft sequence of the approximately 33.8-Mbp genome of this strain. To the best of our knowledge, this is the first genome sequence of Aspergillus strain isolated from marine isopod Ligia oceanica. The phylogenetic analysis supported that this strain was closely related to A. versicolor, and genomic analysis revealed that Aspergillus sp. Z5 shared a high degree of colinearity with the genome of A. sydowii. Our results may facilitate studies on discovering the biosynthetic pathways of secondary metabolites and elucidating their evolution in this species.
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titleGenome Sequencing and Evolutionary Analysis of Marine Gut Fungus Aspergillus sp. Z5 from Ligia oceanica: Supplementary Issue: Bioinformatics Methods and Applications for Big Metagenomics Data
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Aspergillus sp. Z5, isolated from the gut of marine isopods, produces prolific secondary metabolites with new structure and bioactivity. Here, we report the draft sequence of the approximately 33.8-Mbp genome of this strain. To the best of our knowledge, this is the first genome sequence of Aspergillus strain isolated from marine isopod Ligia oceanica. The phylogenetic analysis supported that this strain was closely related to A. versicolor, and genomic analysis revealed that Aspergillus sp. Z5 shared a high degree of colinearity with the genome of A. sydowii. Our results may facilitate studies on discovering the biosynthetic pathways of secondary metabolites and elucidating their evolution in this species.

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titleGenome Sequencing and Evolutionary Analysis of Marine Gut Fungus Aspergillus sp. Z5 from Ligia oceanica: Supplementary Issue: Bioinformatics Methods and Applications for Big Metagenomics Data
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Aspergillus sp. Z5, isolated from the gut of marine isopods, produces prolific secondary metabolites with new structure and bioactivity. Here, we report the draft sequence of the approximately 33.8-Mbp genome of this strain. To the best of our knowledge, this is the first genome sequence of Aspergillus strain isolated from marine isopod Ligia oceanica. The phylogenetic analysis supported that this strain was closely related to A. versicolor, and genomic analysis revealed that Aspergillus sp. Z5 shared a high degree of colinearity with the genome of A. sydowii. Our results may facilitate studies on discovering the biosynthetic pathways of secondary metabolites and elucidating their evolution in this species.

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doi10.4137/EBO.S37532
lad01Evolutionary Bioinformatics
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